Secretariat User Guide
======================
Institute for Human Genetics Research Computing
-----------------------------------------------

.. tip::

   **Contact** `Secretariat System Administrators`_ **with HPC Questions!**

   +------------------+----------------+--------------------+
   | `Vijay Shankar`_ | `John Poole`_  | `Maria E. Adonay`_ |
   +------------------+----------------+--------------------+

   .. code-block:: text

      vshanka@clemson.edu,jopoole@clemson.edu,madonay@clemson.edu

   .. raw:: html

      <hr>
      
   **Contact** `IHG Research Cores`_ **with Research Questions!**

   .. code-block:: text

      ihgcores@clemson.edu

.. toctree::
   :maxdepth: 1
   :titlesonly:

   faq
   tickets

----

.. toctree::
   :maxdepth: 1
   :caption: Accessing Resources

   access/login
   access/onboard
   access/transfer

.. toctree::
   :maxdepth: 1
   :caption: The Compute Environment

   compute/nodes
   compute/modules
   compute/ood

.. toctree::
   :maxdepth: 1
   :caption: Running Jobs

   running-jobs/batch
   running-jobs/interactive
   running-jobs/slurm
   running-jobs/status

.. toctree::
   :maxdepth: 1
   :caption: Software

   software/software
   software/environments

.. toctree::
   :maxdepth: 1
   :caption: Additional resources

   additional-resources/ihg
   additional-resources/vpn
   additional-resources/workshops

.. toctree::
   :maxdepth: 1
   :caption: maintenance

   maintenance/CHANGELOG

.. _Vijay Shankar: https://scienceweb.clemson.edu/chg/dr-vijay-shankar-2/
.. _John Poole: https://scienceweb.clemson.edu/chg/dr-john-poole/
.. _Maria E. Adonay: https://scienceweb.clemson.edu/chg/maria-adonay/
.. _Secretariat System Administrators: https://scienceweb.clemson.edu/ihg/research-cores/bsc-core/
.. _IHG Research Cores: https://scienceweb.clemson.edu/ihg/research-cores/